Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869388.1_cds_XP_016433738.1_29866
CDS Infomation

[gene=LOC107760231] [db_xref=GeneID:107760231] [protein=polyphenol oxidase E, chloroplastic-like] [protein_id=XP_016433738.1] [location=join(39723..40318,40398..40519,41493..42511)] [gbkey=CDS]
Sequence

ATGGCTTCTTCATTTGTTCTTCAAGCTCCATGGGCTATCACAACCAACTTATCTTGTTTT
CCTTCCTTTACAAAACCCTCACATGTTTTCCCACACAAAAAACCAAACAATAAGTTCAAA
GTATCATGCAACCAAAACAATGAGGCAAATAATTCTCAAGAAAAAGTTGAAAGGAGAAAT
CTTCTTCTTGGTTTAGGAGGAATTTATGGTGCTGCCCATCTTTTACCATATGATGCTTTA
GCAAGTCCCATCCCATCCCCTACTCTTACACAATGTGGCACTGCCATAATTGAAGGTGAT
AAACCTGTGCCCTACACTTGTTGTCCTCCTATCCCGGAAATCAAAGACGTTCCTTACTAT
AACCCTCCTCCTGTATCCAGATTTCGCGTTCGTCCTGCAGCTCATACTGTAGATGACGAA
TACATAGCTAAGTATAACGAAGCTTATTCGCGTATGAAGGCGTTGCCGACAGACGATCCT
CGTAGTTTCATGCAACAAGCCAATATCCATTGTGCTTATTGCAATGGTGCTTATAAAGTT
GGAGGCAAAGAGTTACAAGTTCACTTCTCGTGGCTTTTCTTCCCTTTTCATAGATGGTAC
ATATACTTCTATGAGAGAATCTTGGCTTCCCTAATTGATGACCCTACATTTGCTTTGCCA
TATTGGAATTGGGACAATCCTAAAGGCATGCATTTGCCTGACATGTTTGATGTCGAAGGT
ACAAGTATATATAACGAAAGGCGAAACCAAAAGCATAGGAATGGGTTTATTATGGATCTT
GGTTATGCTGGAGAAGATGTGGTAGCAAATGATCTACAAAAACTGGTTAATAATCTCACT
CTAATGTATCGTCAAATGATCACTAATGCCCCTTGCCCTTCGCTCTTCTTTGGCAAACCT
TATAGATTTGGAAGTGAACCTAGTCCAGGGATGGGTACTATAGAAAATGTGCCACATAAT
TCTATACATAGATGGGTTGGTGATCCAAGACAACCAAATGAAGAAGACATGGGAAATTTT
TATTCGTCAGGCAAAGATCCTGCATTTTTTTCACTTCACGCCAATGTTGATCGAATGTGG
ACAATATGGAAAACACTGGGAGGAAAACGTAAGGATATTAGTGACCCAGATTATTTGGAC
ACTGAGTTCTTTTTCTACGATGAAAAGGCAAAGCCTTTTCGTGTTAGGGTTCGAGATTGC
TTGGATGAAAAGAAATTGGGATATACATTTCAACCAATGGATATACCTTGGAAGAATTTC
AAGCCACAACCAAGAAAGAACAAAAAGAATGTCAAGATTGATCCAAATTCAGTTCCACCA
GCTAGTCAAGTATTCCCTATAAAGAAATTGGACAAGACTGTAACATTTTCAGTGGCTAGA
CCTAAAAGATTAAGAACTAAAAAAGAGAAGGAAGATGAAGAGGAACTATTGACTTTCAAG
AATGTGGAATTGGATGTGAGAAAGTTTGTAAGGTTTGATGTTTTCCTCAATGAGGATAAT
GATGTGATTGCAAATGAGATAGACAGGACAGAATTTGTTGGGAGTTTTGCAAATTTACCA
CATATTCATGATGATCCCAAAAAAGAAAAATTTCCTGAATTTAGCCTGGCTATTAATGAA
TTATTGGAGGATTTAAAACTTGAAGGTGATGATCTTGTTGTGGTGACTCTGGTTCCTAAA
AGTGGAGGGGAAAATGTTTCCATTGAAGCTGTTGAGATCCAGTTGGTCCCTTGTTAA

Peptide Sequence

PEP ID

XP_016433738.1
PEP Infomation

PREDICTED: polyphenol oxidase E, chloroplastic-like [Nicotiana tabacum]
Sequence

MASSFVLQAPWAITTNLSCFPSFTKPSHVFPHKKPNNKFKVSCNQNNEANNSQEKVERRN
LLLGLGGIYGAAHLLPYDALASPIPSPTLTQCGTAIIEGDKPVPYTCCPPIPEIKDVPYY
NPPPVSRFRVRPAAHTVDDEYIAKYNEAYSRMKALPTDDPRSFMQQANIHCAYCNGAYKV
GGKELQVHFSWLFFPFHRWYIYFYERILASLIDDPTFALPYWNWDNPKGMHLPDMFDVEG
TSIYNERRNQKHRNGFIMDLGYAGEDVVANDLQKLVNNLTLMYRQMITNAPCPSLFFGKP
YRFGSEPSPGMGTIENVPHNSIHRWVGDPRQPNEEDMGNFYSSGKDPAFFSLHANVDRMW
TIWKTLGGKRKDISDPDYLDTEFFFYDEKAKPFRVRVRDCLDEKKLGYTFQPMDIPWKNF
KPQPRKNKKNVKIDPNSVPPASQVFPIKKLDKTVTFSVARPKRLRTKKEKEDEEELLTFK
NVELDVRKFVRFDVFLNEDNDVIANEIDRTEFVGSFANLPHIHDDPKKEKFPEFSLAINE
LLEDLKLEGDDLVVVTLVPKSGGENVSIEAVEIQLVPC

Transcript Sequence

Gene sequence data has not been registered.